PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29529.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MIKC_MADS
Protein Properties Length: 195aa    MW: 22535.1 Da    PI: 9.2323
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.47.6e-231059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                +i ++  rq+ f+kRr+g++KKA ELS+LCd++v v+i+s++g+l+e+ss
  PHT29529.1 10 PILDNNCRQIAFCKRRKGLIKKARELSILCDVDVGVVIVSNRGRLHEFSS 59
                6778889*****************************************96 PP

2K-box35.25.2e-13911692098
       K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 ++++     e Lq + R++   + + L++ +L +Le++L++ l + Rs+K++llle++++l ++ek l+eenk L+ ++
  PHT29529.1  91 KYSRFMTMGELLQATERQFEEINADGLTVTDLVHLENELQTTLIQTRSRKTHLLLESVKDLHEQEKLLREENKLLEDNI 169
                 56677777889999999998888899***********************************************999876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MGRKKLEIKP ILDNNCRQIA FCKRRKGLIK KARELSILCD VDVGVVIVSN RGRLHEFSST  60
NSMTGILQRY ERHVEAAKEI SAEIQVAELS KYSRFMTMGE LLQATERQFE EINADGLTVT  120
DLVHLENELQ TTLIQTRSRK THLLLESVKD LHEQEKLLRE ENKLLEDNIA GMKKNRKVNE  180
MSHLPPQRVT LNFLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65050.21e-36MIKC_MADS family protein