PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT29510.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 303aa    MW: 34915.9 Da    PI: 8.0741
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT29510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.32.5e-5291381129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eel+++yLkkk++ +k+++ evi+e+d++kvePw+L+++++     ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + + +
  PHT29510.1   9 VPPGFRFHPTEEELLHYYLKKKLSFHKFDM-EVIREIDLNKVEPWELQERCNIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRN-S 105
                 69****************************.99**************964444222456*************************************9.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                  +++g++ktLvfy+grap+g+ktdW+mheyrle
  PHT29510.1 106 FKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138
                 899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MASSSNGGVP PGFRFHPTEE ELLHYYLKKK LSFHKFDMEV IREIDLNKVE PWELQERCNI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSFKKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDA DENISEDGWV ICRVFKKKNL FKIGNEAGTA ATSSHHQPPR  180
TTFTHKDDHG SYLLHQLPQH GHDLNYSQVP VVATLPQYYT HNSNNNLELA QNLIKSSSLG  240
YHHDFSSSGA DQSAPCESGL EVASSNMNND HQWGINIDHR LVESNQINQL SLRGEMDFWS  300
YGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.11e-106NAC family protein