PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT29130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 199aa MW: 23015.4 Da PI: 9.2315 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 63.4 | 5.4e-20 | 88 | 157 | 8 | 77 |
DUF573 8 seeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgke 77 s+ D+++lL+G +++k++ g +p++di+ fyef+k++++++vsksql++Kir L+kKf k vk+ + + PHT29130.1 88 SKADQVALLRGKVKYKEQIGIEPKADISTFYEFIKEKLQANVSKSQLSDKIRTLQKKFMKSVKDGEMMVD 157 899**********************************************************999443333 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 199 aa Download sequence |
MAPKAKPRLG YPSPFASSSK DEQVEESLEE EQKFENGQEK YGEETKEDEP PKKLITQNHF 60 NPYQNRFNFI LNPKLKMGQD LYPNLTQSKA DQVALLRGKV KYKEQIGIEP KADISTFYEF 120 IKEKLQANVS KSQLSDKIRT LQKKFMKSVK DGEMMVDDKA KVLEEKCKKL DDAKATLILN 180 HLDFIREHCG LVVDGMRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00390.1 | 1e-11 | GeBP family protein |