PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT28764.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 238aa MW: 26501.8 Da PI: 8.0362 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 47.6 | 4.7e-15 | 84 | 140 | 18 | 74 |
DUF573 18 GlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaks 74 G +++k++ g +p++d++ fyef+k++++++vsksql++K r L+kKf k vk+ + PHT28764.1 84 GKVKYKEQIGIEPKADMSTFYEFIKEKLQANVSKSQLSDKTRTLQKKFIKSVKDGEM 140 5589**********************************************9998443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MRWVNKKASL MIHAFLASSC DVVVYELQLK LSYAVDTMGM GLHRLQCSWS PSKIQRIEYC 60 PCPVILITAS GLQGEQPLVD GIIGKVKYKE QIGIEPKADM STFYEFIKEK LQANVSKSQL 120 SDKTRTLQKK FIKSVKDGEM MLDDKAKILE EKCKNLDDAK ATLILNHLDF IREHCGLVVD 180 GMRDCCSSSG DSSTCSSFKE KVEGGGSPKR DLSLGAMVEC KQEDSKWCRV STSSPLSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 2e-08 | GeBP family protein |