PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT28329.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Nin-like | ||||||||
Protein Properties | Length: 217aa MW: 23760.1 Da PI: 9.8025 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 20.9 | 7.1e-07 | 155 | 169 | 38 | 52 |
RWP-RK 38 qyGIkRWPhRkiksl 52 q+GI+RWP+Rki+++ PHT28329.1 155 QHGISRWPSRKINKV 169 89***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MLRSISYVKD VRGEALRHQA SQCLADGGGF KKAVVALMEA TWDNVANGRT RCDLIEEQQS 60 HVELNGAKGA EGVNGTAEDH NYSSFSENKQ TGKKSERKRG KNKKTISLEV LQQHFAGSLT 120 DAVKSLGGML FKILGTYSSL CIAYNNCPLF PLPVQHGISR WPSRKINKVN RSLSKLKRVI 180 ESMQEADGTF SLTSLAPNSL PITIGSIYWP TGMTDSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 6e-26 | Nin-like family protein |