PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT28065.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 326aa    MW: 36193.1 Da    PI: 5.4951
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT28065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC120.28.8e-38298599
       NF-YC  5 fwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99
                fw+ +   ie++t+++nh+lPlari+k  k  ++vk+isae+P+l+skacelfi eltlrsw ha+en+r +++ +d+aaa+ rtd fdfl   vp+d
  PHT28065.1  2 FWHFKrheIEHSTNLRNHQLPLARIRKTAKDTPNVKKISAEVPILFSKACELFIQELTLRSWFHADENNRYSVQGNDVAAAIRRTDHFDFLAH-VPTD 98
                56543344**********************************************************************************975.5555 PP

Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MFWHFKRHEI EHSTNLRNHQ LPLARIRKTA KDTPNVKKIS AEVPILFSKA CELFIQELTL  60
RSWFHADENN RYSVQGNDVA AAIRRTDHFD FLAHVPTDEI MGEATAAATV TGVVGSTSSG  120
VPDYNPPMGQ PGPSEVTMGR ASVPLVHPSA YFQPQSWQPT PSLPQVWQPQ PPQSQAWPSS  180
SSALQPQPLL QWWQPPPPQF QAWQLPPSFS QAWQPQPPQS LAWPSSSGAW QPQPLPSPSS  240
SQGWQLPPPQ SQAWQLLPSS SQAWQLQPSS SQAWQLQPSS SQEGQPQPPP SQECQWVWQP  300
VEDNPDNPSG DGGNPDGHRT DILEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.14e-46NF-YC family protein