PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT27407.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 230aa MW: 26644 Da PI: 10.3117 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175 | 2.1e-54 | 18 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkkv + ++++ ++i+evd+yk++Pw+Lp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v+++ +++ PHT27407.1 18 LPPGFRFHPTDEELVVHYLKKKVVTAPIPV-DIIAEVDLYKFDPWELPAKAIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVFTSgGNK 115 79****************************.99***************7777899**************************************997778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg+kt+W+mheyr+ PHT27407.1 116 KVGVKKALVFYGGKPPKGVKTNWIMHEYRV 145 8***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MESTDSSTAT RHQQPHQLPP GFRFHPTDEE LVVHYLKKKV VTAPIPVDII AEVDLYKFDP 60 WELPAKAIFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVFT SGGNKKVGVK 120 KALVFYGGKP PKGVKTNWIM HEYRVAENKI NNKPLGCDTI XXXXXXXXXX XXXXXXXXXX 180 XXXXXXXXXX XXXXXLIKVL NFLTKKFIYM IVKKRRRENT LFPPLNYEQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 8e-88 | NAC family protein |