PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27265.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 388aa MW: 42883.1 Da PI: 4.2333

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.2e-14	317	363	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ PHT27265.1 317 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 363 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MLQTVFCIPL LDGVLELGTT ERVQEDIEFI HHIKGFFIEQ QQPQPPKPAL SEHSTSNPTT 60 FSEPHVYSGN TPPPASIALA DRDGRIAGEE DVEEDEDEDE DQEEDDNEAE LDSDNIAIQS 120 GVSRAEACEL MQLDMSEAIR LGSPDDGSNN MDSDFNLVGA GQAGNTTESF KAETAISWAN 180 FQDIQHLPGV PSYDELAQDD THYSQTVSAV LEHPSNTSSI IGCISPNSAQ SSFTLWRTDC 240 TRPDPLLDRG GGSQWLLKNI LFTVPFLHTN LYQAEEAASP KSQDVVTTTD SSAASTASRF 300 RNGCTITITH QEEPSGNHVL AERRRREKLN ERFIILRSLV PFVTKMDKAS ILGDTIEYVK 360 QLRKKVQDLE TRARHNDATK DAGIFFDA

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MLQTVFCIPL LDGVLELGTT ERVQEDIEFI HHIKGFFIEQ QQPQPPKPAL SEHSTSNPTT  60
FSEPHVYSGN TPPPASIALA DRDGRIAGEE DVEEDEDEDE DQEEDDNEAE LDSDNIAIQS  120
GVSRAEACEL MQLDMSEAIR LGSPDDGSNN MDSDFNLVGA GQAGNTTESF KAETAISWAN  180
FQDIQHLPGV PSYDELAQDD THYSQTVSAV LEHPSNTSSI IGCISPNSAQ SSFTLWRTDC  240
TRPDPLLDRG GGSQWLLKNI LFTVPFLHTN LYQAEEAASP KSQDVVTTTD SSAASTASRF  300
RNGCTITITH QEEPSGNHVL AERRRREKLN ERFIILRSLV PFVTKMDKAS ILGDTIEYVK  360
QLRKKVQDLE TRARHNDATK DAGIFFDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	327	ERRRRE
2	323	328	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	6e-32	bHLH family protein