PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27204.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 279aa    MW: 31305.7 Da    PI: 7.6344
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.44.9e-11133156225
     G2-like   2 prlrWtpeLHerFveaveqLGGse 25 
                 pr+rWt++LH++Fv+av+ LGG+e
  PHT27204.1 133 PRMRWTSTLHAHFVHAVQLLGGHE 156
                 9*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MRDTVLSMVP DLSLQISLPS CISKSDQFKE AIRFDSTTDS GSSASVGSDL SHENNGYFHL  60
DKIKPFNLPL VPSYEPTLSL GFGQVPTGTN VHHHNHHHHH HQYQHYQPQI YGRDFKRSSR  120
MNISGVKRTA RAPRMRWTST LHAHFVHAVQ LLGGHEPKGQ GENVFVNQHK GINNIGEYEK  180
SGEEIDAVSQ SSTMPQNMAH NMRDPSSFMP DQTNAWSHSN RDRPFANYPH IYSKMGGIET  240
ANNSSSNDTL VNLEFTLGRP SWKMEQAGSS SNDLTLLKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.17e-36G2-like family protein