PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT27049.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 269aa MW: 31264 Da PI: 4.7503

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT27049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.1	4.1e-24	3	128	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 G+rFhPtdeel+ +yLk+ v + l+ ++ik +d+++ +ePw++ +++ek yf s+ ++ +++ k+ +r++ +g+Wk + + +++ + k+ PHT27049.1 3 SLGYRFHPTDEELI-NYLKNFVLHGVLPPRDFIKVADLFEdLEPWEIM---TGSEKTRYFLSRLKRFKNSTKKFSRTVGKGTWKGQNSGNPIEDGlkKN 97 57**********.9******999999998626*5...5678899******99******************9877688 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k++L + + ++++ ++ +W+m+ey l PHT27049.1 98 TTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 128 88******9999999********76 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MLSLGYRFHP TDEELINYLK NFVLHGVLPP RDFIKVADLF EDLEPWEIMT GSEKTRYFLS 60 RLKRFKNSTK KFSRTVGKGT WKGQNSGNPI EDGLKKNTTI GYKRSLKYKS DNEKDENNDK 120 WLMKEYFLPD EYFRKSNKNY AFVICKIKEK KKNEKKNKGV VNDDVMEEEV DEFIDYLLES 180 IPDNHQVITN GDDNRLAVAN EVNYEVMRTN YEASTSTLHE DYGGEGRSNY LEGGGVEDFN 240 GINHLLLGVE DINDENCCID YDELLEIIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	6e-17	NAC family protein