PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT26785.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 408aa MW: 46301.2 Da PI: 7.1623

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT26785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.7e-50	32	157	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++++ + PHT26785.1 32 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENSRSI 129 79*************************.89***********8778899***************************************** PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+g+apkg +++W+m+eyrl PHT26785.1 130 GLKKTLVFYSGKAPKGIRSSWIMNEYRL 157 ************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MSQSQQQQDH DNINNNTIKG DDDDDHEHDM VMPGFRFHPT EEELVEFYLR RKVEGKRFNV 60 ELITFLDLYR YDPWELPALA AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM 120 IRTENSRSIG LKKTLVFYSG KAPKGIRSSW IMNEYRLPQH ETERLQKAEI SLCRVYKRAG 180 VEDHPSLPRS LLTTRASSSS SSRGTTSIKK QQQDSSLVSP LFVGQSSQQQ QQMDEKLSTE 240 TSASSTSTDH HHHHQHHHHV ATSLGLNSLS NSYTNIALDP NIGGAVTSSL ITTSSTLTPF 300 TSLVSTTHNA DDLHRLINLE QAVAFHNNQH HFHNPINHPS VVAAQQFSPL LLQQPHLAPQ 360 QPQSLLLQGS LQSSAAAAFS DRLWEWNSIN QADNANCKDP YQPNDPFK

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MSQSQQQQDH DNINNNTIKG DDDDDHEHDM VMPGFRFHPT EEELVEFYLR RKVEGKRFNV  60
ELITFLDLYR YDPWELPALA AIGEKEWYFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM  120
IRTENSRSIG LKKTLVFYSG KAPKGIRSSW IMNEYRLPQH ETERLQKAEI SLCRVYKRAG  180
VEDHPSLPRS LLTTRASSSS SSRGTTSIKK QQQDSSLVSP LFVGQSSQQQ QQMDEKLSTE  240
TSASSTSTDH HHHHQHHHHV ATSLGLNSLS NSYTNIALDP NIGGAVTSSL ITTSSTLTPF  300
TSLVSTTHNA DDLHRLINLE QAVAFHNNQH HFHNPINHPS VVAAQQFSPL LLQQPHLAPQ  360
QPQSLLLQGS LQSSAAAAFS DRLWEWNSIN QADNANCKDP YQPNDPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-107	NAC family protein