PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT26679.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 323aa    MW: 35506.9 Da    PI: 10.006
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT26679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY924.5e-29244302259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYGqK +kgs++pr+YY+Cts  gCp+kk+ve++ +dp ++++tYe+eH+h+
  PHT26679.1 244 ADECSWRKYGQKLIKGSPYPRAYYKCTSFpGCPAKKHVEKAMDDPMMLVVTYEEEHHHK 302
                 699************************877****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MNKELALQEA ASTGLKAMEH LIKLAANEPL VQVDCREITD FAVAKLKKAN SMVGRTGHAR  60
FRRGPVQVRR QAQNDVKSQE QAYQSQDSLT LLSLSPYGYM EKERVQAPMS LSVVAPVTVS  120
VQTGLTLGFK KPSVNVDGAG VGAGVMKWKD AFGRMKNRMS SSSFLLSITN EGNGSIANVA  180
LSSSMPLLPM VQAVFAGKQP SATGKRCCEQ EQSDDGLSKK KRKVLPRKVI RTPVISSKTT  240
DITADECSWR KYGQKLIKGS PYPRAYYKCT SFPGCPAKKH VEKAMDDPMM LVVTYEEEHH  300
HKQVTVQEYN SQMMVLGSAE GKE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219224KKKRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.26e-70WRKY family protein