PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT26364.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 279aa    MW: 31219.6 Da    PI: 4.7187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT26364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19182232255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  PHT26364.1 182 HYRGVRVRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAFRMRG 232
                 8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MYTNCEVEND FEVLESIRRH LLEDWEAPLM SSDNSTTSEF SRSNSIESNM LANFLSNEFD  60
YSSGIFHDHI FNESGLPNIK LEPQTSIESP EMWYLPEFVA PVTSSENSTT SEFSRSCSIE  120
SEMVDNFFSN EFDYSAGIYH DNTINDYTIP TSLQEVKLES PVATTPPPPP PPEAAAPKPA  180
KHYRGVRVRP WGKFAAEIRD PAKNGARVWL GTYETAEDAA LAYDRAAFRM RGSRALLNFP  240
LRVNSGEPEP VRVGSKRLSA SPEKTSTVSS STKRNKKVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-37ERF family protein