PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT26243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 270aa MW: 31619.2 Da PI: 4.4642 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.4 | 2.7e-23 | 3 | 129 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 GfrFhPtdeel+ +yLk+ + ++ l+ ++ik +d+++ +ePw++ + +eek yf s+ ++ +++ k+ + ++ +g+Wk + + +++ + k+ PHT26243.1 3 SLGFRFHPTDEELI-NYLKNFLLHEMLPPRDFIKVADLFEdLEPWEIM--AGSEEKTRYFLSRFKRFKNSTKKFSTTVGKGTWKGQNRGNPIEDGlkKN 98 57************.9**********999999****998626*****6..45677788999999998888888888999*************9977678 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++ g k++L + + ++++ ++ +W+m+ey l PHT26243.1 99 TTSGYKRSLKYKSDNEKDENNDKWLMKEYFL 129 88**********9999999**********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MLSLGFRFHP TDEELINYLK NFLLHEMLPP RDFIKVADLF EDLEPWEIMA GSEEKTRYFL 60 SRFKRFKNST KKFSTTVGKG TWKGQNRGNP IEDGLKKNTT SGYKRSLKYK SDNEKDENND 120 KWLMKEYFLP DEYFRKSSKS YTFVICKIKE KEKNEKKNKG VISDDVMEEE VDEFIDYVSE 180 SIPDNHQVIT NDDDNQFAVT NEVNYKVMRT NYEASTSCTL HEDDGECRVN YLEDGGVEDF 240 NGIDHLLLGV EDINDENCCI DYDELLEIIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 4e-16 | NAC family protein |