PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT25841.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 181aa    MW: 20421.7 Da    PI: 10.7655
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT25841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.64.8e-11108148650
         AP2   6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50 
                 Vr +k +g+++ eIrd +     + kr++lg+f taeeA + +   +
  PHT25841.1 108 VRKRK-SGKFATEIRDpF-----SkKRIWLGTFNTAEEASEVYQSKK 148
                 89888.7*********66.....44**************99886655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MVRKRKCGKL GTEEKLKVAI FAKSENGSSG DLPLMADSQT SNSLKNKKFT TEYEEKLKVA  60
KNAKVKWSIS AKSEIGSSSS EVKIQSLSLI NKKSLSFDQV SGKLPPMVRK RKSGKFATEI  120
RDPFSKKRIW LGTFNTAEEA SEVYQSKKLE FQEKLNRAKN ANKKRLFLQN VNLGCLLVIH  180
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.18e-15ERF family protein