PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT25650.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 281aa    MW: 30698.1 Da    PI: 7.1509
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT25650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.83.2e-162172601759
                 T-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  17 gsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 gs   r YY+Cts  gCp+kk+ver+ edp ++++tYe+eH+h+
  PHT25650.1 217 GSGKKRVYYKCTSFpGCPAKKHVERAMEDPMMLIVTYEEEHHHT 260
                 67789*******877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MNKELALQEA ASTGLQTMEH LIKLAANESV VQVDCREITD FAVVKLKKAN AMVGRTGHAR  60
FRCCPVQVQA QNKAESQAQA QDQVHDSLTL LSLSPYGYKE KERVLASMTL SVVASVAAPV  120
QTELTLGFKM PSVNDDVGGA GVGNMKWKDD FGSMKNWINS SSFLSFITGE GSESIVNVVP  180
PPSSSMLLLP MAQVVSAEKQ SSATGKRCRE QEQSGDGSGK KRVYYKCTSF PGCPAKKHVE  240
RAMEDPMMLI VTYEEEHHHT QVTIQEYNSQ MMAFGLAGEK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.28e-33WRKY family protein