PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127657.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 722aa MW: 77779.9 Da PI: 6.3657 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.3 | 6.7e-33 | 308 | 365 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_027127657.1 308 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSQ-EGHITEIIYKGAHNHPK 365 8****************************************.***************85 PP | |||||||
2 | WRKY | 103.7 | 9.9e-33 | 517 | 575 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_027127657.1 517 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 575 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 722 aa Download sequence |
MGEFDDHVAI IGDWMPPSPS PRALFSTLLG DDVSLRMVAE PTSENKAGFS FPGPVEHSAS 60 ASSDQKDGSQ GGAAVDQTGK FSSMSEQRMS SRGGLMERMA ARAGFNAPRL NTESIRPPDL 120 SQNLEVRSPY LTIPPGLSPT TLLDSPVFLT NSLVQPSPTT GKLGFLMSGS SRNATVTEFP 180 DKSKENCFQN VNTSSFAFRP ILESGPPLFF GASNRQPFPS IEVSVQSGNT LPPRSVEHAK 240 SAALNQPADF SRPSAAKDTV HNDILSEPSS FQNVGGGSEH SPPLDEQQED DADQRGGGDQ 300 NISGAPAEDG YNWRKYGQKQ VKGSEYPRSY YKCTHPNCPV KKKVERSQEG HITEIIYKGA 360 HNHPKPPPNR RSALGSSNTL SDLLVENSEQ VAMGADGNPG WTTMQKGNFD WRHDNLEETS 420 SAALGPEYGN GTTSLQAQNG SQLESGDGVD GSSTFSNDED DEDRGTHGSV SLGYDEGDES 480 ESKRRKIESY ATDMSGATRA IREPRVVVQT TSEVDILDDG YRWRKYGQKV VKGNPNPRSY 540 YKCTSAGCTV RKHVERASHD LKSVITTYEG KHNHDVPAAR NSSHVNSGIS GTLPAQAGAA 600 VQSHVHRPEP SQLHNCIAQF ERPPLGSFAL PGRPPLGPTH GFGFGMNQQG LPNMTLAGLG 660 PPNQGKIPAL PVHPYLGQPR PMNEMGRMLP KGEPKMEPMS DPGLNLSNGS SVYHMSRLPL 720 GP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 0.0 | WRKY family protein |