PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | SBP | ||||||||
Protein Properties | Length: 213aa MW: 23798.5 Da PI: 4.8111 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 71.4 | 1.7e-22 | 105 | 154 | 2 | 51 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEE CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhe 51 C++e+C+adl++ k+yh+rhkvCe h+ka+vv+v+gl+qrfCqqCsr + XP_027127445.1 105 CRAENCKADLTDSKSYHKRHKVCEYHAKAEVVVVEGLKQRFCQQCSRINK 154 9**********************************************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MEPHMHHLRQ SSSAVHSPFA PTKKVTEEAE TDTEEEEEEE EEVEEEEEEE EDGNGGFGAE 60 IEVEPELKKK RMNFDEGPRK RGSRTAAEGA GGGGGAVAVA PPPGCRAENC KADLTDSKSY 120 HKRHKVCEYH AKAEVVVVEG LKQRFCQQCS RINKCQLMGF WLFSASYLPL DNLLLLLSRK 180 FSNLQGPRLG YIVYPDSTTS QNLMRQREVV ADA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.2 | 3e-20 | SBP family protein |