PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027127128.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 274aa    MW: 29116.1 Da    PI: 4.8919
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027127128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.5e-2973130359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers  dp+ + +tY+ eHnh+
  XP_027127128.1  73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSCLDPTKLLVTYSCEHNHP 130
                     99************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVQKNPLDHD QQEDSTSTPE NVADDSPFSG DEAYEVTAPS PKKRKGAQKK VITVPIGEGD  60
GSRSKGEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSCLDPTKLL  120
VTYSCEHNHP IPTTTTKHHP TTTSAAAAAA PSATATSTST STSSTATGNV PVKSAAEDEY  180
GVFANRPGLE SDDSSSSSFN ELAGELGWFS NVGSTMMDSP SLVGPAWVDA DVALMLPIGE  240
EDQFLFGDLG ELPECSVVFR RRGLEGTPCC AGSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.24e-61WRKY family protein