PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027127128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 274aa MW: 29116.1 Da PI: 4.8919 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91 | 9.5e-29 | 73 | 130 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers dp+ + +tY+ eHnh+ XP_027127128.1 73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSCLDPTKLLVTYSCEHNHP 130 99************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MVQKNPLDHD QQEDSTSTPE NVADDSPFSG DEAYEVTAPS PKKRKGAQKK VITVPIGEGD 60 GSRSKGEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSCLDPTKLL 120 VTYSCEHNHP IPTTTTKHHP TTTSAAAAAA PSATATSTST STSSTATGNV PVKSAAEDEY 180 GVFANRPGLE SDDSSSSSFN ELAGELGWFS NVGSTMMDSP SLVGPAWVDA DVALMLPIGE 240 EDQFLFGDLG ELPECSVVFR RRGLEGTPCC AGSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 4e-61 | WRKY family protein |