PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027126696.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 352aa MW: 36867.4 Da PI: 7.5765

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027126696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	40	99	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s XP_027126696.1 40 HHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRS 99 57899****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MQDIHAISGG GGVAGGGNRL FAGGSGGGDR RLRPHHNQNH HQALKCPRCD SLNTKFCYYN 60 NYNLSQPRHF CKSCRRYWTK GGVLRNVPVG GGCRKTKRSK PKQAASADVA VAGAPAPGER 120 KSNSHSSSES SSLTATTTAA KKTPGAGTTG EVASATVNSS SSGASNLMNF TDSRFFLAQM 180 NPSTSFEHPQ PLINPAVTSE GQIFTDMGSF TSLMTSSNDP AMLGFANVTA TDISGYRLQQ 240 SHQGAVLDDQ SSNQMAGTAG GGGGDHELKM DQINCGFLDQ TAQIGFPGLQ QNRISNGGLQ 300 GLDWHINGGG GGGDDGGGEQ GLFDFSGTVD QAYWGQNQWA DNDQSLNFPP LV

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MQDIHAISGG GGVAGGGNRL FAGGSGGGDR RLRPHHNQNH HQALKCPRCD SLNTKFCYYN  60
NYNLSQPRHF CKSCRRYWTK GGVLRNVPVG GGCRKTKRSK PKQAASADVA VAGAPAPGER  120
KSNSHSSSES SSLTATTTAA KKTPGAGTTG EVASATVNSS SSGASNLMNF TDSRFFLAQM  180
NPSTSFEHPQ PLINPAVTSE GQIFTDMGSF TSLMTSSNDP AMLGFANVTA TDISGYRLQQ  240
SHQGAVLDDQ SSNQMAGTAG GGGGDHELKM DQINCGFLDQ TAQIGFPGLQ QNRISNGGLQ  300
GLDWHINGGG GGGDDGGGEQ GLFDFSGTVD QAYWGQNQWA DNDQSLNFPP LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	2e-43	Dof family protein