PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125764.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 309aa    MW: 34622.3 Da    PI: 4.3637
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125764.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-10127169855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er+RR r+++++  Lr+l+P+      +K++Ka+i   Av Y+++Lq
  XP_027125764.1 127 SERKRRGRMKEKLYALRSLVPNI-----TKMDKASIIGDAVLYVQDLQ 169
                     6*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEGTADILGL EMGNINDFGF IDFMDVTNFE QFIELIRGET AEPAVEFCAN FDCDHITGCI  60
AGESELVQPP EDQLFDFNIA SFSEFNLVPE QTKVAEEEND GEEESSATTT TPTNRSKKTD  120
RSRTLVSERK RRGRMKEKLY ALRSLVPNIT KMDKASIIGD AVLYVQDLQM QAKKLKAEIA  180
GLESSLSQPN NYPGESFLNA KKPNFTINLP LIKKIFQMEV FPVEEREFYV RMVCNKGQGI  240
ATLLYKALES LAGFIVHSSN LAAAAETYIF TFTLNVNEFE VEINLPNLKL WIASAFLNQG  300
FDFVALPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-89bHLH family protein