PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125023.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 624aa    MW: 67429.6 Da    PI: 7.1047
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.8e-30271330159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+k+v+r aed +++++tYeg+Hnh+
  XP_027125023.1 271 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApNCPVRKQVQRYAEDMSILTTTYEGTHNHP 330
                     58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
MDMEAAYGGN SVKKEDQEKK AESSGDEDCC TEEVLHKVGN GRRAQDDKIN QSSPNRKDFT  60
SSIQGSFMPK MEMSSSEFNS NVSSSALAGR ADLLKSTKAE MGEVMEENQK LRMHLDRVMK  120
EYRALQMQFH DMVQQEPNKS SSTISTHRET GEPELVSLSL GMSSSDGKKD DHFSRKIHGK  180
EKVDNDDDDK EVLALGLDCK FELPKYQENE PSPNPSLAAS SGEVKEEEGG KTWPPKNSLK  240
NVRNEEDEVS QQNPAKRARV SVRVRCDTPT MNDGCQWRKY GQKTAKGNPC PRAYYRCTVA  300
PNCPVRKQVQ RYAEDMSILT TTYEGTHNHP LPISATAMAS TTSAAASMLM SGSTTSTSGL  360
SPSAASILSS ASFNGLNFYL SDNTKPTPIY LPNSSLSSSS SCPTITLDLT TSSNASSHLS  420
KLGNFPPRSY STTQNLNFSP LESNALPLSW SNGVLSYGPQ AQPYNKNQNI GSLNFGRQLQ  480
EAHYQSYLQK NNSISNSSSQ QSLPAETLAA ATKAIASDPS FQSALAAALT SIIGPGTSST  540
ARVLGSQTAA DKSGHNLKLN DQSFPILSSF PPSTSTVNKC ASTFLSSSNP PSSANSQPGS  600
LMFLSPSLSF PSPNNNSTSN VRLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.14e-55WRKY family protein