PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027125022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 632aa    MW: 68185.4 Da    PI: 6.5209
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027125022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.5e-30277336159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  XP_027125022.1 277 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCAEDMSILITTYEGTHNHP 336
                     58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 632 aa     Download sequence    
MDMEAAPRKS VHGGSSVKKE DQQKKAESSG DEDCCTEEVF LKAGNGKGGQ DDKIHQSSPN  60
RQDFTSKIQG FFMPKMEMTS SEFNSNVSSS AQAGQADLLK STKAEMGEVM EENQRLRMYL  120
DRAMKDYRAL QMQFNDMVQQ EPNKSSSTIT THQETEEPEL VSLSLGMSSS DGKKDDHFSS  180
KNHGKEKVDK DGEDDKKVLA LGLDCNFELP KDQENEPSPN PSLEASSGEV KEEEGGEKWP  240
PQKSLKNVRS EEDEVSQQNP AKRARVSVRV RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY  300
YRCTVAPNCP VRKQVQRCAE DMSILITTYE GTHNHPLPVS ATAMASTTSA AASMLMSGST  360
TSTSGLLPPS NFASANLNGL NFFLSDNSKP KPFYLPNSSL SSSPSFPTIT LDLTTSSNAS  420
SNLTKLGSFP PRSYSATRDL NFSSLESNAL PLSWNNGVLS YGPQAQPYNK NQSISSLNFG  480
RQPQETLYQS YSQKNHPILN SSAQQSLPAE TIAAATKAIT SDPSFQSALA AALTSIIGSG  540
AGGTTGAPAS QTSADKSGQN LKLNDQSFPI LSSFPSSTST VNKCAPTFLN SSKPPSSANS  600
QPGSLMFLSP SLSFPTPSNK STSPGDNRDR IS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-60WRKY family protein