PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027124622.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 318aa    MW: 35211.3 Da    PI: 8.1212
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027124622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.1e-30160219159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  XP_027124622.1 160 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 219
                     58***************************99****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDYTSLVDTS LDLNIKPLRL LDDGLKQEVQ SNLIGGTTVP VNEEAGALVE ELNRVSAENK  60
KLTEMLTVLC ENYNALRNHL MDYMSKNPGT DNNNGSRKRK SESTTTNNNN DTIIDAATNG  120
PSESSSSDEA SCKKPREEHI KAKVSRVYAR TEPSDTSLIV KDGYQWRKYG QKVTRDNPSP  180
RAYFKCSFAP SCPVKKKVQR SVEDQSILVA TYEGEHNHPH PSKMDQTPSN STRCVTLGPV  240
PCSTSLSSSG PTITLDLTKP KSHEETRNSS TRKVNSPEIQ QYIIEQMASS LTKDPSFKAA  300
LAAAISGKFL QHNQTEKW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196101SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-98WRKY family protein