PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027124336.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 124aa    MW: 14008.8 Da    PI: 10.0121
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027124336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.3e-3058115359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+   gCp+ k+ve + e+p+++++tYegeHnh+
  XP_027124336.1  58 DEYSWRKYGQKPIKGSPHPRGYYKCSNMrGCPAIKHVEXCLEEPSMLIVTYEGEHNHP 115
                     9*************************988****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MACFSYNLVR RCSGRGEDGS VKCGSSGRCH CSRKRKHRVK RSIKVPAISN KLADIPPDEY  60
SWRKYGQKPI KGSPHPRGYY KCSNMRGCPA IKHVEXCLEE PSMLIVTYEG EHNHPRLPSQ  120
SANT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-65WRKY family protein