PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027124336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 124aa MW: 14008.8 Da PI: 10.0121 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.2 | 2.3e-30 | 58 | 115 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+ gCp+ k+ve + e+p+++++tYegeHnh+ XP_027124336.1 58 DEYSWRKYGQKPIKGSPHPRGYYKCSNMrGCPAIKHVEXCLEEPSMLIVTYEGEHNHP 115 9*************************988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MACFSYNLVR RCSGRGEDGS VKCGSSGRCH CSRKRKHRVK RSIKVPAISN KLADIPPDEY 60 SWRKYGQKPI KGSPHPRGYY KCSNMRGCPA IKHVEXCLEE PSMLIVTYEG EHNHPRLPSQ 120 SANT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 1e-65 | WRKY family protein |