PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027124248.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 350aa    MW: 39399.9 Da    PI: 5.2329
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027124248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS88.11.4e-2722234941170
            GRAS  41 laayfteALaarlarsvselykal..ppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa 133
                     ++++f+eAL++r+  ++ ++      +  + +++ + +   ++ + +++ P+ ++++++a qa+ + v++++++H +D+ i  G+QW  L+qaL 
  XP_027124248.1 222 IVFHFAEALQHRIDMQTGKITPERiiERFAYARNLELDFNLSFLACHQAIPFTQVTQFAAMQAVIDNVKSATKIHLVDLHIRSGVQWTVLMQALV 316
                     799***********97777664431255555555577777888889************************************************* PP

            GRAS 134 sRpegppslRiTgvgspesgskeeleetgerLakfAe 170
                     +R+ + p lRiT+vg     +k+++eetg+rL +fA+
  XP_027124248.1 317 ERD-DRPALRITAVGT---MNKQRMEETGKRLISFAQ 349
                     **5.669*********...67***************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEDYEADEQE ANGGKKQRQP PQPPDTDWFD VEDNSLYGLY QQQNNPTPSK VAFLEGGQQA  60
TSTPPQFNWV QNDFQHLVST PAVHSFQPIY DQATAKNNEQ PQQQRLPETG GKWQQLKGKT  120
HSFTLASLEL LSNYGKGFKN AAREDQNWSN DSPTNIDQDS SQGRRLSLGE IIRAAGARYI  180
QFSTKNVDGF SGLIHPYASA ITDISVAETA DVELVQECCP EIVFHFAEAL QHRIDMQTGK  240
ITPERIIERF AYARNLELDF NLSFLACHQA IPFTQVTQFA AMQAVIDNVK SATKIHLVDL  300
HIRSGVQWTV LMQALVERDD RPALRITAVG TMNKQRMEET GKRLISFAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59450.19e-14GRAS family protein