PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027124101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 604aa MW: 67966.6 Da PI: 5.271 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.8 | 3.9e-13 | 344 | 388 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N+++ Lr l+Pk + Kl+ a+iL A+eY+k+Lq XP_027124101.1 344 LMAERKRRKKLNDRLYSLRALVPKiS------KLDRASILGDAIEYVKELQ 388 589*********************66......******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 604 aa Download sequence |
MNLVQNFTER LRPILGLKSW DYFAIWGLTE DQRSLELVDC CCAGTENIHS GEELFPLSPS 60 LPCRDVIYQH PRTKACDLLA QLPSSIPLDS GCGMYGETLM SNQARWLNFS PNVDSSLSGN 120 SMGTRVLTPV PGGLVEFYVA KQVPEDQEII EFITAQCNIS LEQQSIFIHA DTIHSSFSAN 180 VDGLHAVEGS DGKASCKIFS SPVNPSTGKQ TLELPSDVSM DQIHLNHSPL NIAQAFSYIS 240 DNAGSKNDTM FYEGTHELNT FTSSMENGIQ DMEAALQKHM MSQSGNMLMQ MMEPLPNKED 300 QGNENDSYKQ ENGPSNSVSD SDPNDDEDDA KYRRRTEKGQ SKNLMAERKR RKKLNDRLYS 360 LRALVPKISK LDRASILGDA IEYVKELQKQ VKDLQDELEE NSDDEDPRNS GITNNPNILP 420 PNVFQGNGMN FGVYKSEHET TSNGNHKRIS GNGGTDLSSQ EPENIADKVQ QMEPQVEVTQ 480 LDGNEFFVKV FCEHKPGGFV RLMEALNSIG LEVNNVNATR HTCLVSYIFK VERKDSEMLQ 540 ADHVRESLLE LTRNPSRGWS DMAKASENED KMDLYQLHHH HHHHHHSRLH NHQINSHHLQ 600 HLHN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 333 | 353 | RRRTEKGQSKNLMAERKRRKK |
2 | 347 | 354 | ERKRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16910.1 | 1e-132 | bHLH family protein |