PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027123880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Dof | ||||||||
Protein Properties | Length: 352aa MW: 36809.4 Da PI: 7.8486 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.9 | 1.1e-38 | 40 | 99 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s XP_027123880.1 40 HHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRS 99 57899****************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MQDIHAISGG GGVAGGGNRL FAGGSGGGDR RLRPHHNQNH HQALKCPRCD SLNTKFCYYN 60 NYNLSQPRHF CKSCRRYWTK GGVLRNVPVG GGCRKTKRSK PKQAASADVA VAGAPAPGER 120 KSNSHSSSES SSLTATTTAA KKTPGAGTTG EVASATVNSS SSGASNLMNF TDSRFFLAQM 180 NPSTSFEHPQ PLLNPAVTSE GQIFTDMGSF TSLMTSSNDP AMLGFANVTA TDISGYRLQQ 240 SHQGAVLDDQ SSNQMAGTAG GGGGDHELKM DQINCGFLDQ TAQIGFPGLQ QNRISNGGLQ 300 GLGWHINGGG GGGDDGGGEQ GLFDFSGTVD QAYWGQNQWA DNDQSLNFPP LV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60850.1 | 2e-43 | Dof family protein |