PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027122266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 232aa MW: 26127 Da PI: 9.7655 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 4e-05 | 106 | 125 | 3 | 22 |
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C++C+ s+s++sn+k+Hir XP_027122266.1 106 CKICKVSCSSPSNYKQHIRG 125 ******************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MAEERKENIM SVELAIQREL AYREKIASFL SGKEKEELLP LKVPCSTTFT SPYPSPMQNV 60 GQSSISTSAS RNQSSYRGKS PTLSPGPGHG KADQQCNISN RSDIFCKICK VSCSSPSNYK 120 QHIRGEKHRA MMHSPKLNKN AAVGPSKNQQ PRCNLCQIVC MDKTSLQLQL NGQKHKAKLR 180 MNELGRKGEI SQQFWCEMCQ VPCNNEETFQ LHLKGKNHVA RKYALEEEKK AI |