PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027122186.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 160aa MW: 18640.5 Da PI: 9.7655

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027122186.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.3	2.9e-19	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++ Fsvrk++ +k+ ++g it+r++ C k+ +++ + + ++rtra t+tg + k+ + + + + k++v++l+leHnHel XP_027122186.1 26 KFYNKYAFKMSFSVRKDYLNKN-KDGVITSRRYSCCKKCVKRKYEGD-AMSKRTRAPTKTGYETKMIIALLRgTMKYRVHNLVLEHNHEL 113 6*****************99.8899*****99999988888.8999*************9999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MDCSKLTEDK IPELGMEFNS KEDAYKFYNK YAFKMSFSVR KDYLNKNKDG VITSRRYSCC 60 KKCVKRKYEG DAMSKRTRAP TKTGYETKMI IALLRGTMKY RVHNLVLEHN HELHIAQCSH 120 MMPSQRKVSE VQGFQPEISK DTGFSLKQSH ELMGKETDFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	4e-09	FAR1 family protein