PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027122057.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 329aa MW: 36695.7 Da PI: 4.4737

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027122057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.8e-09	270	303	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_027122057.1 270 WPYPTEADKIALASSTGLDQKQINNWFINQRKRH 303 58*****************************885 PP
2	ELK	30.1	1.1e-10	223	244	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K+ Ll KYsgy++sL++EF+ XP_027122057.1 223 EIKEKLLVKYSGYISSLRHEFC 244 89*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEDMYGLPSS NTTSTEGNPS TCQPPIAASL KEDDFEAFGA SWSSALFDSS ASPDAAGAIT 60 CNSIKRSSTT GTGSSSSEEE SFSAMKASIS SHPLYTKLLE AYIDCQKVGA PPEIAMFLDE 120 ILQENQLSIN NTGTYCGNDD PELDEFMETY CDVLSKYKLD LEKPYDEASK FLTNMESQLS 180 NLCSNTPRML DEAARSSNED GSSGEVEVLQ EKSSNGPAEV NNEIKEKLLV KYSGYISSLR 240 HEFCRKKKKG KLPKEARQIL LNWWKVHCDW PYPTEADKIA LASSTGLDQK QINNWFINQR 300 KRHWKPPENL QYPSLINNNE YGSFFLNVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-84	TALE family protein