PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027121976.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 528aa    MW: 58765.7 Da    PI: 5.9011
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027121976.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS363.52.9e-1111565271374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs..elykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+lL++cAeav+ +d++ a+ lL++l+  a   g+++qR+a++f+++La rla  ++  ++   +p  +  + ns+++  al+l +e++P+++f
  XP_027121976.1 156 LVQLLISCAEAVACRDKTHASVLLSELRAKALVFGSSFQRVASCFVQGLADRLALVQPlgTVGYVVPKMNIMDVNSDKREEALCLVYETCPYIRF 250
                     689**************************************************983332134444455666666799****************** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     +h +aN+ Ilea+ege  vH++D++++    +G QW  L+q+La+R ++pp +lRiT+vg     s e+ + +g+ L+ +A++lg+++e +v v+
  XP_027121976.1 251 GHYVANSSILEAFEGECLVHVVDLGMTlglpHGHQWRRLIQSLANRGGQPPrRLRITAVGL----SVERFQVIGDELEAYAHSLGINLESSV-VE 340
                     ***********************98873333788*************777779********....9*************************9.7* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     ++le+l++++++v  gE+l+Vn++lqlh +++es    +   +vL+++ +lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ 
  XP_027121976.1 341 SNLENLKPQDIKVLDGEVLVVNSILQLHCVVKESRGALN---SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKY 432
                     *******************************88877777...8**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     +  r+k+E++++++ei+n+v+ceg +r erhe++ +Wr+r+++aGF+++p++  + +qak  l+k++  +gy+v ee+g+lvlgWk++p++++S+
  XP_027121976.1 433 DTRRAKMEQFYFAEEIKNIVSCEGPARLERHERVDQWRRRMSRAGFQAAPIK--MIAQAKQWLAKTNsCEGYTVVEEKGCLVLGWKSKPIIATSC 525
                     **************************************************97..567999999999999************************** PP

            GRAS 373 Wr 374
                     W+
  XP_027121976.1 526 WK 527
                     *8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MAPGVLDPAE SYNDECNFEM SDAGFFDPGF RTSFSPMCQP FLGILENASF LWIPTLSDET  60
GDQKRLKRTV NCTDSTDNSS ISYSRSSSFS SSGSGGIYRT SSTNSVNSLA RHHFRDHIWT  120
YTQRYLAAEA VEEAISGSDQ DAGNEDQDDN GDGMKLVQLL ISCAEAVACR DKTHASVLLS  180
ELRAKALVFG SSFQRVASCF VQGLADRLAL VQPLGTVGYV VPKMNIMDVN SDKREEALCL  240
VYETCPYIRF GHYVANSSIL EAFEGECLVH VVDLGMTLGL PHGHQWRRLI QSLANRGGQP  300
PRRLRITAVG LSVERFQVIG DELEAYAHSL GINLESSVVE SNLENLKPQD IKVLDGEVLV  360
VNSILQLHCV VKESRGALNS VLQIIHELSP KVLVLVEQDS SHNGPFFLGR FMEALHYYSA  420
IFDSLDAMLP KYDTRRAKME QFYFAEEIKN IVSCEGPARL ERHERVDQWR RRMSRAGFQA  480
APIKMIAQAK QWLAKTNSCE GYTVVEEKGC LVLGWKSKPI IATSCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-80GRAS family protein