PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027121976.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 528aa MW: 58765.7 Da PI: 5.9011 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 363.5 | 2.9e-111 | 156 | 527 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs..elykalppsetseknsseelaalklfsevsPilkf 93 lv+lL++cAeav+ +d++ a+ lL++l+ a g+++qR+a++f+++La rla ++ ++ +p + + ns+++ al+l +e++P+++f XP_027121976.1 156 LVQLLISCAEAVACRDKTHASVLLSELRAKALVFGSSFQRVASCFVQGLADRLALVQPlgTVGYVVPKMNIMDVNSDKREEALCLVYETCPYIRF 250 689**************************************************983332134444455666666799****************** PP GRAS 94 shltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183 +h +aN+ Ilea+ege vH++D++++ +G QW L+q+La+R ++pp +lRiT+vg s e+ + +g+ L+ +A++lg+++e +v v+ XP_027121976.1 251 GHYVANSSILEAFEGECLVHVVDLGMTlglpHGHQWRRLIQSLANRGGQPPrRLRITAVGL----SVERFQVIGDELEAYAHSLGINLESSV-VE 340 ***********************98873333788*************777779********....9*************************9.7* PP GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278 ++le+l++++++v gE+l+Vn++lqlh +++es + +vL+++ +lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ XP_027121976.1 341 SNLENLKPQDIKVLDGEVLVVNSILQLHCVVKESRGALN---SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKY 432 *******************************88877777...8**************************************************** PP GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372 + r+k+E++++++ei+n+v+ceg +r erhe++ +Wr+r+++aGF+++p++ + +qak l+k++ +gy+v ee+g+lvlgWk++p++++S+ XP_027121976.1 433 DTRRAKMEQFYFAEEIKNIVSCEGPARLERHERVDQWRRRMSRAGFQAAPIK--MIAQAKQWLAKTNsCEGYTVVEEKGCLVLGWKSKPIIATSC 525 **************************************************97..567999999999999************************** PP GRAS 373 Wr 374 W+ XP_027121976.1 526 WK 527 *8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 528 aa Download sequence |
MAPGVLDPAE SYNDECNFEM SDAGFFDPGF RTSFSPMCQP FLGILENASF LWIPTLSDET 60 GDQKRLKRTV NCTDSTDNSS ISYSRSSSFS SSGSGGIYRT SSTNSVNSLA RHHFRDHIWT 120 YTQRYLAAEA VEEAISGSDQ DAGNEDQDDN GDGMKLVQLL ISCAEAVACR DKTHASVLLS 180 ELRAKALVFG SSFQRVASCF VQGLADRLAL VQPLGTVGYV VPKMNIMDVN SDKREEALCL 240 VYETCPYIRF GHYVANSSIL EAFEGECLVH VVDLGMTLGL PHGHQWRRLI QSLANRGGQP 300 PRRLRITAVG LSVERFQVIG DELEAYAHSL GINLESSVVE SNLENLKPQD IKVLDGEVLV 360 VNSILQLHCV VKESRGALNS VLQIIHELSP KVLVLVEQDS SHNGPFFLGR FMEALHYYSA 420 IFDSLDAMLP KYDTRRAKME QFYFAEEIKN IVSCEGPARL ERHERVDQWR RRMSRAGFQA 480 APIKMIAQAK QWLAKTNSCE GYTVVEEKGC LVLGWKSKPI IATSCWKC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 4e-80 | GRAS family protein |