PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027121702.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 640aa MW: 68921.3 Da PI: 6.7091

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027121702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.5e-30	284	343	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_027121702.1 284 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCAEDMSILITTYEGTHNHP 343 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MDMEAAPRKS VHGGSSVKKE DQEKKAESSG DEDCCTEEGF LKAGNGKGGQ DDKIHQSSPN 60 RQDFTSKIQG FFMPKMEMTS SEFNSNVSSS AQAGQADLLK STKAEMGEVM EENQRLRMCL 120 DRAMKDYRAL QMQFNDMVQQ EPNKSAEPNK SSSTITTHQE TEEPELVSLS LGMSSSDGKK 180 DDHFSGKNQG KEKVDKDGDH DKKVLALGLD CKFELPKDQE NEPSPNPSLE ASSGEVKEEE 240 GGEKWPPQKS LKNVVRSEED EVSQQNPAKR ARVSVRVRCD TPTMNDGCQW RKYGQKIAKG 300 NPCPRAYYRC TVAPNCPVRK QVQRCAEDMS ILITTYEGTH NHPLPVSATA MASTTSAAAS 360 MLMSGSTTST SGLLPPSNFA SANLNGLNFF LSDNSKPKPF YLPNSSLSSS PSFPTITLDL 420 TTSSNASSNL TKLGSFPPRS YSATRDLNFS SLESNALPLS WSNGVLSYGP PQAQPYNKNQ 480 SISSLNFGRQ PQETLYQSYS QKNHPILNSS AQQSLPAETI AAATKAITSD PSFQSALAAA 540 LTSIIGSGTG GTTGAPVSQT SADKSGQNLK LNDQSFPILS SFPSSTSTVN KCAPTFLNSS 600 KPPSSANSQP GSLMFLSPSL SFPTPSNKST SPGDNRDRIS

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MDMEAAPRKS VHGGSSVKKE DQEKKAESSG DEDCCTEEGF LKAGNGKGGQ DDKIHQSSPN  60
RQDFTSKIQG FFMPKMEMTS SEFNSNVSSS AQAGQADLLK STKAEMGEVM EENQRLRMCL  120
DRAMKDYRAL QMQFNDMVQQ EPNKSAEPNK SSSTITTHQE TEEPELVSLS LGMSSSDGKK  180
DDHFSGKNQG KEKVDKDGDH DKKVLALGLD CKFELPKDQE NEPSPNPSLE ASSGEVKEEE  240
GGEKWPPQKS LKNVVRSEED EVSQQNPAKR ARVSVRVRCD TPTMNDGCQW RKYGQKIAKG  300
NPCPRAYYRC TVAPNCPVRK QVQRCAEDMS ILITTYEGTH NHPLPVSATA MASTTSAAAS  360
MLMSGSTTST SGLLPPSNFA SANLNGLNFF LSDNSKPKPF YLPNSSLSSS PSFPTITLDL  420
TTSSNASSNL TKLGSFPPRS YSATRDLNFS SLESNALPLS WSNGVLSYGP PQAQPYNKNQ  480
SISSLNFGRQ PQETLYQSYS QKNHPILNSS AQQSLPAETI AAATKAITSD PSFQSALAAA  540
LTSIIGSGTG GTTGAPVSQT SADKSGQNLK LNDQSFPILS SFPSSTSTVN KCAPTFLNSS  600
KPPSSANSQP GSLMFLSPSL SFPTPSNKST SPGDNRDRIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	7e-61	WRKY family protein