PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027121642.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 212aa MW: 24454.7 Da PI: 10.1033 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.2 | 1e-21 | 44 | 128 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y+eYA ++GF +r+ +s+ks+r+g+i++r + C ++++ k ++++r+ r gC+a++ +k+ek g+w+v k++ +HnH+l+ XP_027121642.1 44 YYDEYALRTGFVTRVLSSRKSERDGSIISRGLGCRGIYSHNSAK----VSSQKRNRRREGCTAMMLIKREKPGRWVVRKFVRDHNHPLV 128 8*********************************7554444444....457888899******************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 212 aa Download sequence |
MLVDDGTRRL QTSGCGETSL CEVEQGQEPY EDMLFESEGA ARAYYDEYAL RTGFVTRVLS 60 SRKSERDGSI ISRGLGCRGI YSHNSAKVSS QKRNRRREGC TAMMLIKREK PGRWVVRKFV 120 RDHNHPLVDS LPRRRPTFDE KDKRIQELTA ELRVKKRLSA AYKEQLLSLM KDVENHNEHL 180 STKVQVVRNN LKELEARRQE LVNHNSGTYG KG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G43280.1 | 7e-56 | FAR1 family protein |