PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027120827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 150aa MW: 16893.8 Da PI: 4.9303 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 170.8 | 1.6e-53 | 17 | 112 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefi+fvtseas+kc++e+rkt+ngdd++wal+tlGf+dy+ plk yl +yreleg+ XP_027120827.1 17 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFIGFVTSEASEKCRKERRKTVNGDDICWALGTLGFDDYAGPLKRYLDRYRELEGD 111 89********************************************************************************************9 PP NF-YB 97 k 97 + XP_027120827.1 112 R 112 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MVDNLGASAS SEEGGIKEQD RLLPIANVGR IMKQILPPNA KISKEAKETM QECVSEFIGF 60 VTSEASEKCR KERRKTVNGD DICWALGTLG FDDYAGPLKR YLDRYRELEG DRSGNQDKVS 120 NSAEEMEEPS SYRSNIVQPR NQAEPSYRRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 2e-58 | NF-YB family protein |