PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027120772.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 410aa MW: 46061.8 Da PI: 5.2165 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.1 | 2.9e-12 | 203 | 254 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_027120772.1 203 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 254 79****************************...9*****************9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence |
MEKEENYSGS IPGNFTGLDY TLEHHQQNQH PQLMKPQIGE ASGDDGSNQM VDYMLHNTAQ 60 QQPMSSGFCG STSLDKLSFA DVMQFADFGP KLALNQAKTP EEETVLNDSV YFLKFPVLNE 120 KLQDDPDHQA LMIPRPINEE SNSKVGEEGD QRPDQDQARG FGNTSVQLQF LGDNREKSPL 180 TTETKNKKKR SRTIKSSEEV ESQRMTHIAV ERNRRKQMNE HLRVLRSLMP GSYVQRGDQA 240 SIIGGAIEFV RELEQLLQCL ESQKRRRLYG DGPRPIGDSS SSIPIQQPQP PFFPGMPLSS 300 DQMKLVELET GLHEETAESK SCLADVEVKL LGFDALIKIL SRRRPGQLIK TIAALEDLQL 360 NILHTNITTI EQTVLYSFNV KVASEARFTA EDIANSIQQI FSFIHANSSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 204 | 215 | RMTHIAVERNRR |
2 | 264 | 268 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24140.1 | 1e-133 | bHLH family protein |