PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027120200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 419aa MW: 45236.6 Da PI: 6.7924 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.6 | 5.2e-33 | 217 | 275 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCts++C vkk+vers+ dp++v++tYeg+H h+ XP_027120200.1 217 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSPSCGVKKRVERSSGDPTTVVTTYEGTHMHP 275 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
MEKDKRLEKN IKPENPMSNL TFSDQIPIPA TLAAIPNIYD IPIGSAPMAS SPPPSYGGGG 60 GGAAHPHDHD MVKMESFGFI DMLTVPDYPC PSIYEMVFQQ LPPMKFQSPP LSQPLLQPQS 120 PLPPPPPPSN HINNNNAPPE SSDVATTPAT PNSPSVSTSS SDAQNDDQQQ NKTPVEGEQE 180 DRDQDKTKKH LKPKKKNQKG QKEPRFAFMT KSEVDHLDDG YRWRKYGQKA VKNSPFPRSY 240 YRCTSPSCGV KKRVERSSGD PTTVVTTYEG THMHPTPLTS RGSLGLVAES SASFICGPSG 300 VGSSNGGGGA GEAVTIGAGF GGAGSGSGPG PSSFFPPPMS QYHHQQPQQF QQQQLQQLPF 360 FRVPTAPASL NFNTHSSSFA HMIVQESSYC PPPPSSFVDN GLLEDIVPSE MLIKEPKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 9e-42 | WRKY family protein |