PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027120093.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 279aa MW: 30068.3 Da PI: 7.6798

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027120093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	51.8	1.8e-16	44	73	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPkti+++m+vkgLtl+h+kSHLQkYRl XP_027120093.1 44 QATPKTIMRTMGVKGLTLYHLKSHLQKYRL 73 7****************************8 PP
2	Myb_DNA-binding	34.8	3.8e-11	46	72	23	48
-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmg.kgRtlkqcksrwqkyl 48 t+ktI+rtmg kg+tl+++ks++qky+ XP_027120093.1 46 TPKTIMRTMGvKGLTLYHLKSHLQKYR 72 8*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGPTCLGMRA LCSPLTPSPA SDGPRSSMKD LLTLSLSSVA LIVQATPKTI MRTMGVKGLT 60 LYHLKSHLQK YRLGKQACKE TTENSKDASC VAESQDTGSS TCASSRMIAQ DINDGYQVTE 120 ALRVQMEVQR RLHEQLEVQR RLQLRIEAQG KYLQSILEKA CKALNDHAVA SAGLEAAREE 180 LSELAIKVAS DCQGMTSVPP LSEVAAGMEN KTPSNLPARI GDCSIDSCLT SNESPVSPVG 240 DGSQAAALKK RARPVFGNGE SLHFDNSMRQ VEWMMTNIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	5e-86	G2-like family protein