PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027119867.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 136aa MW: 14961.3 Da PI: 8.9285 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.4 | 3.5e-05 | 42 | 74 | 18 | 55 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++l+ + +K + a++L A++YI+ Lq XP_027119867.1 42 EKITALQQLVSPY-----GKTDTASVLLDAMDYIRFLQ 74 6788888888888.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MMMEHKRCPV SLDQSSLASL TPKRHKADIS VLSKEKKEKV GEKITALQQL VSPYGKTDTA 60 SVLLDAMDYI RFLQEQVKVL SSPYLCNTPT TTAQEQEPYS LRSRGLCLVP ISCTVGVASS 120 NGADIWAPIK TASQKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05710.3 | 1e-62 | bHLH family protein |