PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027119782.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 366aa MW: 39374.9 Da PI: 7.82

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027119782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.6	1.7e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+vkgLtl+h+kSHLQk+Rl XP_027119782.1 1 MRVMGVKGLTLYHLKSHLQKFRL 23 789*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDAS TLELQRSSSA SSSGMIGRSM 60 NEMQMEVQRR LHEQLEVQRH LQLRIEAQGK YMQTILEKAC QTLAGENMAS AAAAGSYNKG 120 GNQAGGGVVD IKEFGPPLSF PSLQDLNIYG SGEQLELQQG GMVVDRSPSL DGFMSNNNDT 180 QLCHLGKKRP TPPSPYGGGS GKSPASLMWS DHHHHHHHDL RLQELGSAAA SCLGNSQDHH 240 HHHDPFKGDH HHQIQMNNAP GGAGVLSLER SNVDVVIDSM SDSTCSNMYE TKPLISGSCG 300 SDGGMVLGGT DQKNASSKLE RPSPRRASTT ATTPPPSSSS DHRMNPVQIG TGAAGAMSQA 360 RNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE FSDHPIKDAS TLELQRSSSA SSSGMIGRSM  60
NEMQMEVQRR LHEQLEVQRH LQLRIEAQGK YMQTILEKAC QTLAGENMAS AAAAGSYNKG  120
GNQAGGGVVD IKEFGPPLSF PSLQDLNIYG SGEQLELQQG GMVVDRSPSL DGFMSNNNDT  180
QLCHLGKKRP TPPSPYGGGS GKSPASLMWS DHHHHHHHDL RLQELGSAAA SCLGNSQDHH  240
HHHDPFKGDH HHQIQMNNAP GGAGVLSLER SNVDVVIDSM SDSTCSNMYE TKPLISGSCG  300
SDGGMVLGGT DQKNASSKLE RPSPRRASTT ATTPPPSSSS DHRMNPVQIG TGAAGAMSQA  360
RNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.1	1e-51	G2-like family protein