PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027119319.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 398aa MW: 42970.8 Da PI: 9.0654 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.8 | 6.1e-11 | 305 | 350 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l+P+ +k s a++L +Av++Ik Lq XP_027119319.1 305 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 350 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MYPSSTSSSS QGSMGPNGGS STGGLIRYGS APSSLLATAA DSVTNPSSRE FSALGSSHNL 60 HMGPTSSSSS RFFPSSETSS LTSESTCKTS NSNPREKGPN ISSGLHRAFG FKQDNHQGSI 120 IGGAGGAGMV SSSSSSTATT ASPLVRHSSS PPGFLNHLTH ACASNEDNGF PIARTHDISR 180 LNSQLSFTHQ ETLSQISEET ENVDNGLNAE NEKRKSAHTY SNVSYGVGPW EDANTIMFSM 240 GPTSKRAKNM SGDIVNLNSM ETQFQFGMPQ TMLDMSSMDK LLNIPQDSVP CKIRAKRGCA 300 THPRSIAERE RRTRISGKLK KLQDLVPNMD KQTSYADMLD LAVQHIKGLQ NQVQRLHKEL 360 DNCTCGCRKH KILVEEERAE ARTVKLDRKI FVGNARHI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 3e-65 | bHLH family protein |