PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027119172.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 362aa    MW: 41553.4 Da    PI: 4.6681
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027119172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.52.9e-35441352102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++ ws+ +nsf+v+d+ +fa + Lp+yFkh+nf+SFvRQLn+YgF+kv+ e+         weF+++ F +g+++ll++
  XP_027119172.1  44 FLTKTYDLVDDPSTDHIVCWSKGNNSFIVWDPLTFAMNFLPRYFKHNNFSSFVRQLNTYGFRKVDAEK---------WEFSNEGFLRGQRHLLRN 129
                     9****************************************************************998.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_027119172.1 130 IRRRKT 135
                     ***986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MNPLGSSVKE EFPAGSSSWY SDETFSSATP QPMEGLHESG PPPFLTKTYD LVDDPSTDHI  60
VCWSKGNNSF IVWDPLTFAM NFLPRYFKHN NFSSFVRQLN TYGFRKVDAE KWEFSNEGFL  120
RGQRHLLRNI RRRKTPPHLQ SSNPNLESCL EVGRFGLDAE VDRLRRDKQV LMLELVRLRQ  180
QQQNTKAYLK TMEQRLRGTE NKQQQMMTFL ARAIQNPRIL EQLVQQKDKR KELEEAIGNK  240
RRRPIDKGPS FSVGVGEFGQ EGEEVNDYVK LECQDYGHDL TGLTDFELNT LAINMQEPTP  300
PPMNLEEEYV GKEDDSFDDG FWDGLIHEGI ENDIGLRGGE GEDLEDLDLL TDQLGFLGSN  360
PP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229243KRKELEEAIGNKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-116HSF family protein