PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027118103.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 361aa    MW: 40251 Da    PI: 6.9032
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027118103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS239.61.3e-732836040374
            GRAS  40 RlaayfteALaarlar.svselykalppsetseknsseelaalkl.fsev...sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLl 129
                     ++a+ +  AL+++++  ++ e+ +  p  + ++ +++e++ +l+  + e+    P+ +++++ta qaIl+ v +++r+H iD++i+ G+QW  L+
  XP_027118103.1  28 KMAKKIGSALQEKITMeTGGEVLQEKPEGNRRDLTVEEAFLSLHPaLMEChakLPFCRITQFTAIQAILDNVGSAKRIHLIDLGIKCGTQWSVLM 122
                     667777888888888833444444443333333333333333222555542227***************************************** PP

            GRAS 130 qaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvslese 223
                     qaLa+R e p   l+iT+vg+    ske++ee+g++L++fA++l++pf f++ v+++l++++   +++  +E++a+ + l++ +ll+ +++les 
  XP_027118103.1 123 QALANRHECPLeLLKITAVGP----SKEMIEEIGKQLSSFAASLNIPFAFRI-VVSDLQNVDQYLFQLAANEVVAIYSELRMASLLAWPHHLES- 211
                     *******6665499*******....**************************9.7999*****************************99999999. PP

            GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
                        +L+++k+l+P+v+v++e ea++n++ F++rf  +l++ +alfd+le+ + r+s  r+ +E ++l++ i+ +++ +g+e+++r+e+ + Wr+ 
  XP_027118103.1 212 ---LLSTIKKLRPRVMVMIEIEANTNAPLFMDRFNASLSVSAALFDCLESCMDRDSPCRAIIEGMFLREGIQYLITSRGKESIHRQESIGFWRAF 303
                     ...******************************************************************************************** PP

            GRAS 319 leeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     l+++G+ +++ls+ a +qa+l+ +  + +   ++e + + + +gWk+ p+ ++S+W+
  XP_027118103.1 304 LKRFGMVEIALSNWAFCQANLVAKSNPcWSSCTLEVNGKGMAIGWKGTPIHMLSVWK 360
                     ***************************9999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MPEQSPTSEP SNISCSLSLE LSTVDIIKMA KKIGSALQEK ITMETGGEVL QEKPEGNRRD  60
LTVEEAFLSL HPALMECHAK LPFCRITQFT AIQAILDNVG SAKRIHLIDL GIKCGTQWSV  120
LMQALANRHE CPLELLKITA VGPSKEMIEE IGKQLSSFAA SLNIPFAFRI VVSDLQNVDQ  180
YLFQLAANEV VAIYSELRMA SLLAWPHHLE SLLSTIKKLR PRVMVMIEIE ANTNAPLFMD  240
RFNASLSVSA ALFDCLESCM DRDSPCRAII EGMFLREGIQ YLITSRGKES IHRQESIGFW  300
RAFLKRFGMV EIALSNWAFC QANLVAKSNP CWSSCTLEVN GKGMAIGWKG TPIHMLSVWK  360
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.11e-47GRAS family protein