PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027117758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 159aa MW: 17446.1 Da PI: 8.2069 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.5 | 1.5e-05 | 65 | 97 | 18 | 55 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++l+ + +K + a++L +A+eYI+ Lq XP_027117758.1 65 EKITALQQLVSPY-----GKTDTASVLLEAMEYIRFLQ 97 6788888888888.....9******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 159 aa Download sequence |
MLFHSALGLS DQNLQKGANC EGVMMMEHKR CPVSLDQSSL ASLTPKRHKA DISVLSKEKK 60 EKVGEKITAL QQLVSPYGKT DTASVLLEAM EYIRFLQEQV KVLSAPYLCN TPTTTEQEQE 120 PYSLRSRGLC LVPISCTVGV ASSNGADIWA PIKTASQKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G05710.3 | 9e-58 | bHLH family protein |