PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027116888.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 488aa    MW: 54246.3 Da    PI: 5.4864
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027116888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1093.5e-34231132101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y++++d+++++++ ws + +sf+v+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+         weF++++F k+kk+ll++
  XP_027116888.1  23 FLLKTYDMVDDSSTDDIVAWSPTRKSFIVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEEFVKDKKHLLKN 108
                     9********************999*****************************************999.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_027116888.1 109 IHRRK 113
                     ***98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MEAAAAGLIS APGGGGGAGP APFLLKTYDM VDDSSTDDIV AWSPTRKSFI VWNPPEFARL  60
LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFANEEFVK DKKHLLKNIH RRKPIHSHSN  120
PQGTVVDPER TAFEEEIDKL SREKAVLEGN VLRFKQQQST AKVQLEDLTQ RLSGMEKRQD  180
NLLTFLENAV QKPCFVELLS QKLESMDVSA YNKKRRLPQV DQTQYVQENM MVDDHSSSRP  240
EFGNNSIPQD FCNKLTLDLS PAVSDINLLS QSTQSSNEDG EISPKRISEG WPKDVQKCGE  300
TLYAPETLDL SDTGTSFGLK VDSPLPHKAA DAKSPQLHSF QPCLTSSEDG DGHISCHLNL  360
SLASSALPIG RSQSSAKVDH VVEETGKSSE ANLNADGNEA DLSIPMESRK HPDGDTTLSS  420
SQNKQQGPAT QARVNDVFWE QFLTEKPGSM DNEEASSNHR ASPYDEQEHK KLGRGLPRSI  480
KSAEHLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13980.11e-157HSF family protein