PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027116888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 488aa MW: 54246.3 Da PI: 5.4864 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 109 | 3.5e-34 | 23 | 113 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++ ws + +sf+v+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF++++F k+kk+ll++ XP_027116888.1 23 FLLKTYDMVDDSSTDDIVAWSPTRKSFIVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEEFVKDKKHLLKN 108 9********************999*****************************************999.........****************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027116888.1 109 IHRRK 113 ***98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 488 aa Download sequence |
MEAAAAGLIS APGGGGGAGP APFLLKTYDM VDDSSTDDIV AWSPTRKSFI VWNPPEFARL 60 LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFANEEFVK DKKHLLKNIH RRKPIHSHSN 120 PQGTVVDPER TAFEEEIDKL SREKAVLEGN VLRFKQQQST AKVQLEDLTQ RLSGMEKRQD 180 NLLTFLENAV QKPCFVELLS QKLESMDVSA YNKKRRLPQV DQTQYVQENM MVDDHSSSRP 240 EFGNNSIPQD FCNKLTLDLS PAVSDINLLS QSTQSSNEDG EISPKRISEG WPKDVQKCGE 300 TLYAPETLDL SDTGTSFGLK VDSPLPHKAA DAKSPQLHSF QPCLTSSEDG DGHISCHLNL 360 SLASSALPIG RSQSSAKVDH VVEETGKSSE ANLNADGNEA DLSIPMESRK HPDGDTTLSS 420 SQNKQQGPAT QARVNDVFWE QFLTEKPGSM DNEEASSNHR ASPYDEQEHK KLGRGLPRSI 480 KSAEHLSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13980.1 | 1e-157 | HSF family protein |