PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027116786.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 328aa MW: 35247.8 Da PI: 7.1536

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027116786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.8	2.8e-34	68	122	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl XP_027116786.1 68 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 122 79****************************************************8 PP
2	Myb_DNA-binding	77.8	1.4e-24	70	121	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ XP_027116786.1 70 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 121 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MYSSARMPIV QTLPLEAASG GGAGGAGAGA GGGDYHIHHH HHHGGPGMSL DGTNLPGDAC 60 LVLTTDPKPR LRWTAELHER FVDAVTQLGG PDKATPKTIM RTMGVKGLTL YHLKSHLQKY 120 RLGKQACKET TENSKDASCV AESQDTGSST CASSRMIAQD INDGYQVTEA LRVQMEVQRR 180 LHEQLEVQRR LQLRIEAQGK YLQSILEKAC KALNDHAVAS AGLEAAREEL SELAIKVASD 240 CQGMTSVPPL SEVAPGMENK TPSNLPARIG DCSIDSCLTS NESPVSPVGD GSQAAALKKR 300 ARPVFGNRES LHFDNSMRQV EWMMTNIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	1e-119	G2-like family protein