PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027116029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 24917.9 Da PI: 9.5405 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.6 | 3.5e-11 | 70 | 116 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++Er+RR ++ ++++ L++l+P+++ p +K+s +L+++++Y++sL+ XP_027116029.1 70 QNERNRRGKMAESYSVLQSLVPSLF--PIPKPSRERTLTETINYLRSLE 116 58*********************76..*******************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MIAKEKGRNR VSEEEEVGKL FMGIMEGYKD SLIPPLSEFN PLIERTNCEK GSSSSKKRDR 60 TEASEIKSVQ NERNRRGKMA ESYSVLQSLV PSLFPIPKPS RERTLTETIN YLRSLEQEKE 120 RLEGLKSSLL QKPVLSGCTT YLMNPSVTAS LCNGVAFFGI QLPAKRGLLR KIAKAFEKYH 180 AEVLEVAIYV NDHGMLTLTG TFMVGNDGAF VVEKIKKEIL IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 1e-07 | bHLH family protein |