PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027115942.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 167aa    MW: 17817.8 Da    PI: 10.4809
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027115942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.64.2e-193670135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  XP_027115942.1 36 CTDCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 70
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MVDLSDKVSE SEDMNSQTPT PERVSSSSDG TQIKTCTDCG TTKTPLWRGG PAGPKSLCNA  60
CGIRSRKKRR ALLGLNKEEK KPKKSTSSSS SNNNNSSSTS NNYSSGSGDS NSSSGFSLKR  120
KLLSFGRDVV VPLQRPRSST NGQRRKLGEV EQAAFLLMAL SCGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-34GATA family protein