PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027115917.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CAMTA

Protein Properties

Length: 919aa MW: 104109 Da PI: 6.9397

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027115917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.1	5.8e-52	25	141	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e k rwl+++ei+aiL n+++++++ ++ + p+sg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_027115917.1 25 EEaKGRWLRPNEIHAILCNYKHFNVQVKPVNLPPSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 119 45599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le++vlvhy+e++ XP_027115917.1 120 RCYWLLDKSLEHVVLVHYRETQ 141 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MAAIAGSEIH GFRTMKDLDI GNILEEAKGR WLRPNEIHAI LCNYKHFNVQ VKPVNLPPSG 60 TIVLFDRKML RNFRKDGHNW KKKKDGKTVK EAHEHLKVGN EERIHVYYAH GEDNPTFVRR 120 CYWLLDKSLE HVVLVHYRET QEGSPSTPLN SNSSSALSDP SQSLVISEES DSAADRAYYS 180 RERADLDPNC SVNIKDHELR LHEINTLEWD ELLVQDDPNK LIGPQEGKYS SELSYQYGMN 240 GYGITSDSIS DNKLPVESYL EKFPGQVSMN NSGNLNVPAN LCFQTMGAPT ANLLLKDSEQ 300 MTLFAGDSLE HASKDGLQTQ DSFGKWISNV IADSPLPLDD TTLDSSMSTN QSFASPHMNI 360 PQFSAAKQIF NITEISPSWA LSSEETKILV VGYFHEGQSN LSRSNLFCIC GNACARAEPV 420 QSGVFRCVVS PQAPAFVNLF LSFDGHTSIS QVVMFEFRAP IVDNPAISEE RSSWEEFEVQ 480 MRLAHLLFST SRSFNILSTK VTPTALKEAK NFARKTSHIK NHWEFLTKSI KAKEMSFPDA 540 KNCLFELTLQ NRLLEWLLER VAEGCQISER DEQGQGVIHL CAILGYTWAV YPFSWSGLSI 600 DYRDKFGWTA LHWAAYYGRE PMVAKLLTAG AKANLVTDPT SENPGGFTAA DLASKNGHEG 660 LGAYLAEKAL VQHFQDMTLA GNVSGSLQTA KSDSVEPGNF SEDELYLKDT LAAYRTAADA 720 AARIQAAFRE HSLKVQTLAV ESSNPEIEAR NIVAAMKIQH AFRNFETRKK MAAAARIQHS 780 FRTWKMRRDF LNMRRQAIRI QAVFRGFQVR KQYRKIIWSV GVLEKAILRW RLKRKGFRGL 840 HVNPDEVVNN QKEENDVEED FFRASRKQAE ERVERSVVRV QAMFRSKLAQ EEYRRMKLAY 900 NNAAREYEEF ENPDGMRED

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MAAIAGSEIH GFRTMKDLDI GNILEEAKGR WLRPNEIHAI LCNYKHFNVQ VKPVNLPPSG  60
TIVLFDRKML RNFRKDGHNW KKKKDGKTVK EAHEHLKVGN EERIHVYYAH GEDNPTFVRR  120
CYWLLDKSLE HVVLVHYRET QEGSPSTPLN SNSSSALSDP SQSLVISEES DSAADRAYYS  180
RERADLDPNC SVNIKDHELR LHEINTLEWD ELLVQDDPNK LIGPQEGKYS SELSYQYGMN  240
GYGITSDSIS DNKLPVESYL EKFPGQVSMN NSGNLNVPAN LCFQTMGAPT ANLLLKDSEQ  300
MTLFAGDSLE HASKDGLQTQ DSFGKWISNV IADSPLPLDD TTLDSSMSTN QSFASPHMNI  360
PQFSAAKQIF NITEISPSWA LSSEETKILV VGYFHEGQSN LSRSNLFCIC GNACARAEPV  420
QSGVFRCVVS PQAPAFVNLF LSFDGHTSIS QVVMFEFRAP IVDNPAISEE RSSWEEFEVQ  480
MRLAHLLFST SRSFNILSTK VTPTALKEAK NFARKTSHIK NHWEFLTKSI KAKEMSFPDA  540
KNCLFELTLQ NRLLEWLLER VAEGCQISER DEQGQGVIHL CAILGYTWAV YPFSWSGLSI  600
DYRDKFGWTA LHWAAYYGRE PMVAKLLTAG AKANLVTDPT SENPGGFTAA DLASKNGHEG  660
LGAYLAEKAL VQHFQDMTLA GNVSGSLQTA KSDSVEPGNF SEDELYLKDT LAAYRTAADA  720
AARIQAAFRE HSLKVQTLAV ESSNPEIEAR NIVAAMKIQH AFRNFETRKK MAAAARIQHS  780
FRTWKMRRDF LNMRRQAIRI QAVFRGFQVR KQYRKIIWSV GVLEKAILRW RLKRKGFRGL  840
HVNPDEVVNN QKEENDVEED FFRASRKQAE ERVERSVVRV QAMFRSKLAQ EEYRRMKLAY  900
NNAAREYEEF ENPDGMRED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein