PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027115807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | SBP | ||||||||
Protein Properties | Length: 1031aa MW: 114581 Da PI: 7.1128 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.7 | 2.1e-40 | 153 | 230 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC+vhska+ +lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_027115807.1 153 VCQVEDCRADLSNAKDYHRRHKVCDVHSKATRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 230 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1031 aa Download sequence |
MEAKIGGKAY HYYGPVVSDL KALGKRTVEW DLNDWKWDGD LFTAAPLNSL PSDCRSRQFF 60 PTGSEIPTNS LVSNSVSSGS DEMFVGSDKG KRELEKRRRG VDGEDEELTD EAGSLHLKLG 120 GHLYPITEGD VDKWEGKSGK KTKVVGPSSN RAVCQVEDCR ADLSNAKDYH RRHKVCDVHS 180 KATRALVGNV MQRFCQQCSR FHVLQEFDEG KRSCRRRLAG HNRRRRKTHP ESVESGTPAT 240 DERGSNYLLI SLLRILSNIH SNNSSDQTKD QDLLSHLLRS LAGLAGIVNE KNLTGLLPGS 300 QDLQNAGTSD GNPAKVSNLV LQNAEFXPCT GALLSSDCFN LQDPSRNMLQ YSTMPASESA 360 QKRILGDDDN GIVRISSPAQ STLLLPPIEG ILTKASSLGT TVGKTRMNNI DLNNAYDDSQ 420 DCIENLQSSD CPTHIGKASS GCPLWVYQDP YKSSPPQPSG NSGSTSTQSP SSSSGEAQSR 480 TDRIVFKLFG KDPSDFPLAL RKQILDWLSH SPSDIESYIR PGCVILTIYI RMDKSTWEEL 540 CYDLTSSLRR LLDASTDSFW KSGWIYARVR HRVAFVYDGC IVLDTPLPHK SQKSCRILNI 600 KPIAVCASGE VKFSVRGINL SQPTTRLLCA LEGKYLAQER CADVIGGADL YIEHAEIQTL 660 NFTCTVPDVT GRGFIEVEDH GLSSSFFPFI VAENDVCSEI STLESIIEAA EISNGLHGNN 720 QNLEARNQAL DFIHEIGWLL HRSQLKFRLG QQDPNLDTFP FQRFRWLIEF SVEHDWCAVV 780 KMLLNVLFNK LMGEEKRSSI EDALLDIGLL HRAVRRNCRS MVEVLLRYHP DADLNKLSAI 840 RYVFRPDVKG PGGLTPLHIA AGRDGAEHVL DALTDDPGLV GVEAWRSARD STGLTPNDYA 900 CLRGHYSYIH LVQKKINKKW GSQHVVLEIP DGHLQSSMNQ KTADENKSRK VSSLSTEMSV 960 VKPSHVHCRQ CEQKLAYGRN RTSLAIYRPA MLSMVAIAAV CVCVALLFKS SPEVDYVYGP 1020 FRWEYLEYGS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |